Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDATPNAVELTVDNAWFIAETIGAGTFPWVLAITMPYSDAAQRGAFVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGIVALRTGTGKTSNKTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLAHRPPARFDEFSLPTRVGARADERLRSGVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRVLVSPSRAFDGEWVSTFSPGTPFAIAVAIQTLTACLPDGQWFPGQRVSRDFSTQSS |
1TC3 Chain:C ((1-51)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------PRGSALSDTERAQLDVMKLLNVSLHEMSRKISRS---RHCIRVYLKDPVSYGTS---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30178 for 309 contacts (-97.7/contact) +
2D Compatibility (PS) -5423 + (NN) -1383 + (LL) 14280
1D Compatibility (HY) -400 + (ID) 500
Total energy: -23604.0 ( -76.39 by residue)
QMean score : 0.105
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