Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------GALTTS-----TRQGSRVVGFMDFIIALG-----WQII-----PSNIRYIYIL----------------NCSQFMPTSDVTTIYFQAD-SGLESIFVMDSPFYASCTQQLPDKTIK------TYGVTISKKQSIISINFSSSLEPNIMVSAWTASITRTQ--
1K45 Chain:A ((1-168))
MLVANINGGFESTPAGVVTDLAEGVEGWDLNVGSSVTNPPVFEVLETSDAPEGNKVLAVTVNGVGNNPWDIEATAFPVNVRPGVTYTYTIWARAEQDGAVVSFTVGNQSFQEYG-RLHEQQITTEWQPFTFEFTVSDQETVIRAPIHFGYAANVGNTIYIDGLAIASQP
General information:
TITO was launched using:
RESULT:
Template:
1K45.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46252 for 856 contacts (-54.0/contact) +
2D Compatibility (PS) -13645 + (NN) -4208 + (LL) 120
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -68835.0 ( -80.41 by residue)
QMean score : 0.162
(partial model without unconserved sides chains):
PDB file :
Tito_1K45.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K45-query.scw
PDB file :
Tito_Scwrl_1K45.pdb
: