Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MSAFSRFTPLIQSLPASVPFVGPEALERQHGRKIAARIGANESGFGPAPSVLLAIRQAAGDTWKYADPENHDLKQALARHLGTSPANIAIGEGIDGLLGQIVRLVVEAGAPVVTSLGGYPT-FNYHVAGHGGRLVTVPYADDRE-DLEGLLAAVGRENAPLVYLANPDNPMGSWWPAERVVAFAQALPETTLLVLDEAYCETAPRDALPPIESLIDKPNVIRARTFSKAYGLAGARIGYTLSTPGTAQAFD-KIRNHFGMSRIGVAAAIAALADQDYL--KEVTLKIANSRQRIGRIAADSGLAPL--PSATNFVAVDCGKDASYARAIVDRLMSDHGIFIRMPGVAP-LNRCIRISTAPDAEMDLLAAALPEVIRSLAAT |
| 1FG7 Chain:A ((3-356)) | TVTITDLARENVRNLTPYQS-------ARRLGGNGDVWLNANEYPTAVEF------QLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKL--DGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGW--LAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLL-MKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQ-----GIILRDQNKQPSLSGCLRITVGTREESQRVIDALRAEQV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FG7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194060 for 2849 contacts (-68.1/contact) +
2D Compatibility (PS) -38291 + (NN) -31140 + (LL) 2040
1D Compatibility (HY) -13600 + (ID) 3750
Total energy: -278801.0 ( -97.86 by residue)
QMean score : 0.477
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