Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSETTIILTDDGVTDIGMARNTIHQMVGLVDDLVASEATASQLREALYAALARGLGFQASVGQSSPLLLRRSVLLSLRGLARRLARIEADALTDDIQPRDIVLSAKELSEWLQEGDVVTVTIPGGPCTRYRILEGDTSNG
4JB1 Chain:A ((26-83))
--------------------------------LLAHARDEADVREALALARERGLPLLV-IGGGSNLLLTRDVEALVLRMASQGRRIVSDA-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4JB1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15249 for 290 contacts (-52.6/contact) +
2D Compatibility (PS) -6214 + (NN) -924 + (LL) 4096
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -22991.0 ( -79.28 by residue)
QMean score : 0.058
(partial model without unconserved sides chains):
PDB file :
Tito_4JB1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JB1-query.scw
PDB file :
Tito_Scwrl_4JB1.pdb
: