Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEAALTPAFEEPEAPRASPRSRSTLLKRLADVVCLPSSRINAFERSMTADLLVEML-RDANVGEREKVARRLA---------MLNEMPGVLVRLLLRDELPVARALLVDSEKLSDADLISCLYQATTEHRRLIAQRRGVSEVVADALIEVGEPAVIETL-LRNELVKLSHQGVENIVAATRDAQHLIPLLLRRAELRPSHAYVMFWWADSE-ARRVILQRFAVSREILQDAVGDVFALASAEGWQDPLSRKALQFIERRQRNRAAIAKSPFNSLDEAVAAGEG-GFNREIAEEISYLSGLKPMTGAKIFTDPGGEPLAILCKATGLPRGCVRQLW-RGLRRQEVDRTGATDPNLERVL---TVYDAIAVDRAQTVLRYWNWSLTSALTPALLKAIRDGDEAAVDEYSAPQRAAMLALSRDFGR-------- |
| 1XIP Chain:A ((1-381)) | ASSLKDEVPTETSEDFGFKFLGQKQILPSFNEK--LPFASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGDQVLVSTRNALYSLDLEELSE----FRTVTSFEKPVFQLKNVN----NTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDV---TNSQLAVLLKDRS-------FQSFAWRNGEMEKQFEFS---LPSELEELPVEE----------YSPLSVTILS-----PQDFLAVFGNVISETDDEVSYDQKMYIIKHIDGSASFQETFD-------ITPPFGQI--------------VRFPYMY-----KVTLSGLIEPDANVNVLASSCSSEVSIWDSKQVIEPSQDSERAVL-PISEETDKDTNPIGVAVDVVTSGLPLVYILNNEGSLQIVGLFH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15059 for 2726 contacts (-5.5/contact) +
2D Compatibility (PS) -34434 + (NN) 7886 + (LL) 5592
1D Compatibility (HY) 2400 + (ID) 2300
Total energy: -35915.0 ( -13.17 by residue)
QMean score : 0.021
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