Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASWSHPQFEKGADDDDKSEPPVSMLMQVAGAVETSKGGEKWAPVTRNKFLFVGTQVRTGADGGGKLIDQNSGMAQTIGANSVVEITAAGPKAVSGSLSAPEAASGDLVAGLSNRFAEAQRYTTVRRSVKKEAADLKLRVASDITLSPTYPDLVWENMGAQYGYTLVIDGTSHAVPATSGEMVRFRVPSLTPGAHSFGVTVTEGGQAVGQTEK--GGTIVWLSATEDKALVDGVARVKAASTGDEFALGNYLDSKGVTVAAMDAYRKHFASHKDDNDMRPLLIKTYNDLKLRDLRQKEALVYNEQLEGNPGFSSISAHHHHHHHHHH |
| 3V1U Chain:A ((221-286)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------GKVAIVTGAARGIGATIAEVFA------RDGAHVVAIDVESAAENLAETASKVGGTALWLDVTADDA-VDKIS-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8352 for 442 contacts (-18.9/contact) +
2D Compatibility (PS) -6930 + (NN) -2538 + (LL) 14644
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -8576.0 ( -19.40 by residue)
QMean score : 0.033
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