Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGLLSNFRNTIIVSFVLALVIVIGYGHSPHGHDATYFQAIFRWLHVLFGILWIGLLYYFNFVQIRVMPQIPAELKPAVSKYIAPEALFWFRWAALATWVMGVLLAYNRGYLVEAFTLGLAGGYTPGVDMG--FTFIGTGMWLATVMFFNVWVFIWPNQKIALGIVEADADAKAKAAKTAMLVSRTNTLLSIPMLATMAMHQTLFG |
3CLZ Chain:A ((45-70)) | ------------------------------------------------------------------------------------------------------------------AYSLVLAGGYEDDVDHGNFFTYTGSG------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CLZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5243 for 83 contacts (-63.2/contact) +
2D Compatibility (PS) -2774 + (NN) -2373 + (LL) 17532
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 4442.0 ( 53.52 by residue)
QMean score : -0.028
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