Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------GHMGSPVSYYFSYADGGTSHTEYPDDSSAGSFILD-----ITSYKKTGNSTKALSWN-ASGDSWIHVNGSSVSYDENPAKERRTGLVTLKQDESGKTLS----------LKIVQPGKTSID
1HCX Chain:A ((1-127))
GSYPKDKFEKINGTWYYFDSSGYMLADRWRKHTDGNWYWFDNSGEMATGWKKIADKWYYFNEEGAMKTGWVKYKDTWYYLDAKEGAMVSNAFIQSADGTGWYYLKPDGTLADRPEFTVEPDGLITVK
General information:
TITO was launched using:
RESULT:
Template:
1HCX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8116 for 551 contacts (14.7/contact) +
2D Compatibility (PS) -11314 + (NN) -5766 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 550
Total energy: -14714.0 ( -26.70 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_1HCX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HCX-query.scw
PDB file :
Tito_Scwrl_1HCX.pdb
: