Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGDHAWSFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQ-HASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQLFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM-LPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV |
4C9Q Chain:B ((26-313)) | ------NFAINFLMGGVSAAIAKTAASPIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMF--GFKKEEGYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADA-----ARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLKPLV-------SFLASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQA---VKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISMYDQLQMIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89038 for 2046 contacts (-43.5/contact) +
2D Compatibility (PS) -27838 + (NN) 3117 + (LL) 208
1D Compatibility (HY) -28400 + (ID) 7550
Total energy: -149501.0 ( -73.07 by residue)
QMean score : 0.226
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