Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGDHAWSFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQ-HASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQLFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM-LPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV
4C9Q Chain:B ((26-313))------NFAINFLMGGVSAAIAKTAASPIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMF--GFKKEEGYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADA-----ARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLKPLV-------SFLASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQA---VKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISMYDQLQMIL


General information:
TITO was launched using:
RESULT:

Template: 4C9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89038 for 2046 contacts (-43.5/contact) +
2D Compatibility (PS) -27838 + (NN) 3117 + (LL) 208
1D Compatibility (HY) -28400 + (ID) 7550
Total energy: -149501.0 ( -73.07 by residue)
QMean score : 0.226

(partial model without unconserved sides chains):
PDB file : Tito_4C9Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C9Q-query.scw
PDB file : Tito_Scwrl_4C9Q.pdb: