Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVKVQTTKRGDPHELRNIFLQYASTEV-----DGERYMTPEDFVQ-----RYLGLYN---DPNSNPKIVQLLAGVADQT-------KDGLISYQEFLAFESVLCAPDSMFIVAFQLFDKSGNGEVTFENVKEIFGQTII--HHHIPFNWDCEFIRLH-FGHNRKKHLNYTEFTQFLQELQLEHARQAFALKDKSKSGMISGLDFSDIMVT---IRSHMLTPFVEENLVS--AAGGSISHQVSFSYFNAFNSLLNNMELVRKIYSTLAGTRKDVEVTKEEFAQSAIRYGQVTPLEIDILYQLADLYNASGRLTLADIERIAPLAEGALPYNLAELQRQQSPGLGRPIWLQIAESAYRFTLGSVAGAVGATAVYPIDLVKTRMQNQRGSGSVVGELMYKNSFDCFKKVLRYEGFFGLYRGLIPQLIGVAPEKAIKLTVNDFVRDKFTRRDGSVPLPAEVLAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALNVLRDLGIFGLYKGAKACFLRDIPFSAIYFPVYAHCKLLLADENGHVGGLNLLAAGAMAGVPAASLVTPADVIKTRLQVAARAGQTTYSGVIDCFRKILREEGPSAFWKGTAARVFRSSPQFGVTLVTYELLQRWFYIDFGGLKPAGSEPTPKSRIADLPPANPDHIGGYRLATATFAGIENKFGLYLPKFKSPSVAVVQPKAAVAATQ |
| 4NSD Chain:A ((33-336)) | -----------------KIFRYFATLKVISEPGEAEVFMTPEDFVRSITPN-HLGLDQYIIK------------------SIFYTLGECGLISFSDYIFLTTVLSTPQRNFEIAFKMFDLNGDGEVDMEEFEQV--QSIIRS---------CSALTTYFFGADLKGKLTIKNFLEFQRKLQHDVLKLEFERHDPV-DGRITERQFGGMLLAYSGVQSKKLTA-MQRQLKKHFKEGKGLTFQEVENFF-TFLKNINDVDTALSFYH-MAGASLD-KVTMQQVARTVAKV-ELSDHVCDVVFALFDC-DGNGELSNKEFVSIMKQRLM-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NSD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -80587 for 1532 contacts (-52.6/contact) +
2D Compatibility (PS) -24374 + (NN) 193 + (LL) 26452
1D Compatibility (HY) -18000 + (ID) 3500
Total energy: -99816.0 ( -65.15 by residue)
QMean score : 0.402
|
|
|