Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAPSRLQLGLRAAYSGISSVAGFSIFLVWTVVYRQPGTAAMGGLAGVLALWVLVTHVMYMQDYWRTWLKGLRGFFFVGVLFSAVSIAAFCTFLVLAITRHQSLTDPTSYYLSSVWSFISFKWAFLLSLYAHRYRADFADISILSDF |
1KDX Chain:B ((133-142)) | -----------------------------------------------------------------------------------------------------------------------------------SYRKILNDLS----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 119 for 26 contacts (4.6/contact) +
2D Compatibility (PS) -919 + (NN) 333 + (LL) 11940
1D Compatibility (HY) 1200 + (ID) 0
Total energy: 12673.0 ( 487.42 by residue)
QMean score : 0.198
|
|
|