Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGAGPKRRALAAPAAEEKEEAREKMLAAKSADGSAPAGEGEGVTLQRNITLLNGVAIIVGTIIGSGIFVTPTGVLKEAGSPGLALVVWAACG--VFSIVGALCYAELGTTIS-KSGGDYAYMLEVYGSLPAFLKLWIELLIIRPSSQYIVALVFA----TYLLK-PLFPTCPVPEEAAKLVACLCVLLLTAVNCYS-VKAATRVQD-AFAAAKLLALALIILLGFVQIGKG----DVSNLDPNFSFEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMINPYRNLPLAIIISLPIVTLVYVLTNLAYFTTLSTEQMLSSEAVAVDFGNYHLGV---MSWIIPVFVGLSCFG---SVNGSLFTSSRLFFVGSREGHLPSILSMIHPQLLTPVPSLVFTCVMTLLYAFSKDIFSVINFFSFFNWLCVALAI---------IGMIWLRHRKPELERPIK------VNLALPVFFILACLFLIAVSFWKTPVECGIGFTIILSGLPVYFFGVWWKNKPKWLLQGIFSTTVLCQKLMQVVPQET |
| 4DJI Chain:A ((11-431)) | -----------------------------------------------KQLTLLGFFAITASMVMA--VYEYPT-----FATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQI--AIGFIPMLYFVLGALSYILKWPALNEDPI----TKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAIEMDSKTFFPDFSKVGT-------LVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGV-PVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHDANTGVTLEPINSQNAPKGH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -378674 for 3119 contacts (-121.4/contact) +
2D Compatibility (PS) -39241 + (NN) -17234 + (LL) 3576
1D Compatibility (HY) -32400 + (ID) 4900
Total energy: -468873.0 ( -150.33 by residue)
QMean score : 0.347
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