Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEEGARHRNNTEKKHPGGGESDASPEAGSGGGGVALKKEIGLVSACGIIVGNIIGSGIFVSPKGVLENAGSVGLALIVWIVTG----FITVVGALCYAELGVTIP-KSGGDYSYVKDIFGGLAGFLRLWIAVLVIYPTNQAVIALTFS--NYVLQPLFPTCFPPESGLRLLAAICLLLLTWVNCSSVRWATRVQDI-FTAGKLLALALIIIMGIVQICKGEYFWLEPKNAFENFQEPDIGLVALAFLQGSFAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVFANVAYVTAMSPQELLASNAVAVTFGEKLLGV---MAWIMPISVALSTFG---GVNGSLFTSSRLFFAGAREGHLPSVLAMIHVKRCTP----IPALLFTCISTLLMLVT---SDMYTLINY-VGFINYL-FYGVTVAGQIVLRWKKPDIPRPIKINLLFPIIYLLFWAFLLVFSLWSEPVVCGIGLAIMLTGVPVYFLGVYWQHKPKCFSDFIELLTLVSQKMCVVVYPEVERGSGTEEANEDMEEQQQPMYQPTPTKDKDVAGQPQP |
| 4DJK Chain:A ((39-405)) | ------------------------------------------------------------------------GFSLVFFLLLGGILWFIPV--GLCAAEMATVDGW---GVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILK--WPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLH----------TFFPDFSKVGTLVVFVAFI---LSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMN-KNGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHFFLHPRARSP----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252920 for 2504 contacts (-101.0/contact) +
2D Compatibility (PS) -33465 + (NN) -11265 + (LL) 6420
1D Compatibility (HY) -30000 + (ID) 4000
Total energy: -325230.0 ( -129.88 by residue)
QMean score : 0.248
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