Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MPAPQRKHRRGGFSHRCFPTPQTAMTPQPAGPPDGGWGWVVAAAAFAINGLSYGLLRSLGLAFPDLAEHFDRSAQDTAWISALALAVQQAASPVGSALSTRWGARPVVMVGGVLASLGFVFSAFASDLLHLYLGLGLLAGFGWALVFAPALGTLSRYFSRRRVLAVGLALTGNGASSLLLAPALQLLLDTFGWRGALLLLGAITLHLTPCGALLLPLVLPGDPPAPPRSPLAALGLSLFTRRAFSIFALGTALVGGGYFVPYVHLAPHALDRGLGGYGAALVVAVAAMGDAGA-RLVCGWLADQGWVPLPRLLAVFGALTGLGLWVVGLVPVVGGEESWGGPLLAAAVAYGLSAGSYAPLVFGVLPGLVGVGGVVQATGLVMMLMSLGGLLGPPLSGFLRDETGDFTASFLLSGSLILSGSFIYIGLPRALPSCGPASPPATPPPETGELLPAPQAVLLSPGGPGSTLDTTC |
| 4RDQ Chain:A ((1-366)) | TVTYTNRVADARLGTFSQLLLQ-----------------WKGSIYKLLYSEFLIFISLYFAISLVYRLI-----LSESQRLMFEKLALYCNSYAE---------------------LIPVSFVLGFYVSLVVSRWWAQYE-----------------SIPWPDRIMNLVSCNVDGED-------------------EYGRLLRRTLMRYSNLCSVLILRSVSTAVYKRFP-SMEHVVRAGLMTPEEHKKFESLNSP-HNKFWIPCVWFSNLAVKARNEGRIRDSVLLQGILNELNTLRSQCGRLYGYDWISIP---LVYTQVVTVAVYSFFLACLIGRQ------FLDPEKAY---------------PGHELDLFVPVFTFLQFFFYAGWLKVAEQLINPFGEDDDDFETNWLIDRNLQVSLMAVD-EMHQDLPILEKDLYWNEPDPQPP--YTAATAEYKRPSFLGSTFDIS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200954 for 2444 contacts (-82.2/contact) +
2D Compatibility (PS) -37890 + (NN) -19201 + (LL) 5676
1D Compatibility (HY) -21600 + (ID) 3500
Total energy: -277469.0 ( -113.53 by residue)
QMean score : 0.174
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