Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATKTELSPTARESKNAQDMQVDETLIPRKVPSLCSARYGIALVLHFCNFTTIAQNVIMNITMVAMVNSTSPQSQLNDSSEVLPVDSFGGLSKAPKSLPAKSSILGGQFAIWEKWGPPQERSRLCSIALSGMLLGCFTAILIGGFISETLGWPFVFYIFGGVGCVCCLLWFVVIYDDPVSYPWISTSEKEYIISSLKQQVGSSKQPLPIKAMLRSLPIWSICLGCFSHQWLVSTMVVYIPTYISSVYHVNIRDNGLLSALPFIVAWVIGMVGGYLADFLLTKKFRLITVRKIATILGSLPSSALIVSLPYLNSGYIT--ATALLTLSCGLSTLCQSGIYINVLDIAP-RYSSFLMGASRGFSSIAPVIVPTVSGFLLSQDPEFGWRNVFFLLFAVNLLGLLFYLIFGEADVQEWAKERKLTRL |
| 3WDO Chain:A ((117-382)) | ----------------------------------------------------------------------------------------------------------AVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVL---NRESG-------------MVKGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLAD-AGFPAAEHWKVYLAT-MLIAFGSVVPFIIYAEVKRKMKQV-----FVFCVGLIVVA-EIVLWNAQTQFWQLVVGVQLFFVAFNLM---EALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGM---FDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPADI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227882 for 1982 contacts (-115.0/contact) +
2D Compatibility (PS) -25743 + (NN) 6267 + (LL) 9244
1D Compatibility (HY) -15600 + (ID) 1700
Total energy: -255414.0 ( -128.87 by residue)
QMean score : 0.187
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