Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVRTLPLLFLNLGGEMLYILDQRLRAQNIPGDKARKDEWTEVDRKRVLNDII-----STMFNRKFMEELFKPQELYSKKALRTVY-ERLAHASIMKLNQASMDKLYDLMTMAFKYQVLLCPRPKDVLLVTFNHLDTIKGFIRDS-PTILQQVDETLRQLTEIYGGLSAGEFQLIRQTLLIFFQDLHIRVSMFLKDKVQNNNGRFVLPVSGPVPWGTEVPGLIRMFNNKGEEVKRIEFKHGGNYVPAPKEGSFELYGDRVLKLGTNMYSVNQPVETHVSGSSKNLASWTQESIAPNPLAKEELNFLARLMGGMEIKKPSGPEPGFRLNLFTTDEEEEQAALTRPEELSYEVINIQATQDQQRSEELARIMGEFEITEQPRLSTSKGDDLLAMMDEL |
| 2C2V Chain:B ((17-152)) | ----------------------QRLLAEPVPGIKAEPDE----SNARYFHVVIAGPQDSPFEGGTFKLELFLPEE-YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLL--SIQALLSAPNPDDP--NDVAEQWKTNEAQAIETARAWTRLYAMNNI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C2V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28931 for 911 contacts (-31.8/contact) +
2D Compatibility (PS) -12863 + (NN) 7016 + (LL) 16524
1D Compatibility (HY) -4400 + (ID) 2000
Total energy: -24654.0 ( -27.06 by residue)
QMean score : 0.191
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