Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVPGPVSRRAAAAAATVLLRTARVRRECWFLPTALLCAYGFFASLRPSEPFLTPYLLGPDKNLTEREVFNEIYPVWTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYA----QGLLAIQFLEFFYGIATATE-IAYYSYIYSVVDLGMYQKVTSYCRSATLVGFTVGSVLGQILVSVAGWSLFSLNVISLTCVSVAFAV-AWFLPMPQKSLFFHHIPSTCQRVNGIKVQNGGIVTDTPASNHLPGWEDIESKIPLNMEEPPVEEPEPKPDRLLVLKVLWNDF-LMCYSSRPLLCWSVWWALSTCGYFQVVNYTQGLWEKVMPSRYAAIYNGGVEAVSTLLGAVAVFAVGYIKISWSTWGEMTL-SLFSLLIAAAVYIMDT--VGNIWVCYASYVVFRIIYMLLITIATFQIAANLSMERYALVFGVNTFIALALQT-LLTLIVVDA-SGLGLEITTQFLIYASYFALIAVVFLASGAVSVMKKCRKLEDPQSSSQVTTS |
| 1PW4 Chain:A ((20-448)) | ---------------------DPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVE--QGFSRGDL-GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAW-FNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPP-IEEYK---------N-------------D----------------------------TA---KQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKH-F-ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW--DGGFMVMI-GGSILAVILLIVVMIGEKRRHEQLLQELVP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -390362 for 3430 contacts (-113.8/contact) +
2D Compatibility (PS) -40755 + (NN) -2012 + (LL) 5300
1D Compatibility (HY) -18800 + (ID) 2150
Total energy: -448779.0 ( -130.84 by residue)
QMean score : 0.204
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