Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFSKLLEQAGGVGLFQTLQVLTFILPCLMIPSQMLLENFSAAIPGHRCWTHMLDNGSAVSTNMTPKALLTISIPPGPNQGPHQCRRFRQPQWQLLDPNATATSWSEADTEPCVDGWVYDRSVFTSTIVAKWDLVCSSQGLKPLSQSIFMSGILVGSFIWGLLSYRFGRKPMLSWCCLQLAVAGTSTIFAPTFVIYCGLRFVAAFGMAGIFLSSLTLMVEWTTTSRRAVTMTVVGCAFSAGQAALGGLAFA-LRDWRTLQLAASVPFFAISLISWWLPESARWLIIKGKPDQALQELRKVARINGH--KEAKNLTIEVLMSSVKEEVASAKEPRSVLDLFCVPVLRWRSCAMLVVNFSLLISYYGLVFDLQSLGRDIFLLQAL-FGAVDFLGRATTALLLSFLGRRTIQAGSQ--AMAGLAILANMLVPQDLQT---LRVVFAVLGKGCFGISLT-CLTIYKAELFPTPVRMTADGILHTVGRLGAMMGPLILMSRQALPLLPP--------LLYGVISIASSLVVLFFLPETQGLPLPDTIQDLESQKSTAAQGNRQEAVTVESTSL |
| 4LDS Chain:A ((147-427)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AYLVNYAFADIEGWRWMLGLAVVPSVILLVGIYFMPESPRWL-LENRNEEAARQVMKITYDDSEIDKELKEMKEINAISESTWTVIKSPWLGRILIVGCIFAIFQQFIGINAVIF-----YSSSIFAKAGLGEAASILGSVGIGTINVLVTIVAIFVVDKIDRKKLLVGGNIGMIASLLIMAILIWTIGIASSAWIIIVCLSLFIVFFGISWGPVLWVMLPELFPMRARGAATGISALVLNIGTLIVSLF------FPILSDALSTEWVFLIFAFIGVLAMIFVIKFLPETRG--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142245 for 1836 contacts (-77.5/contact) +
2D Compatibility (PS) -26582 + (NN) -5919 + (LL) 20456
1D Compatibility (HY) -26800 + (ID) 3450
Total energy: -184540.0 ( -100.51 by residue)
QMean score : 0.152
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