Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGVCQRTRAPWKEKSQLERAALGFRKGGSGMFASGWNQTVPIEEAGSMAALLLLPLLLLLPLLLLKLHLWPQLRWLPADLAFAVRALCCKRALRARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFLIHGSRRFSYSEAERESNRAARAFLRALGWDWGPDGGDSGEGSAGEGERAAPGAGDAAAGSGAEFAGGDGAARGGGAAAPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVP--TALRRGPLLHCLRSCGARALVLAPEFLESLE---PDLPALRAMGLHLWAAGPGTHPAGISDLLAEVSAEVDGPVPGYLSSPQSITDTCLYIFTSGTTGLPKAARISHLKI-LQCQGFYQLCGVHQEDVIYLALPLYHMSGSLLGIVGCMGIGAT--VVLKSKFSAGQFWEDCQQHRVTVFQYIGELCRYLVNQPPSKAERGH-KVRLAVGSGLRPDTWERFVRRFGPLQVLETYGLTEGNVATINYTGQRGAVGRASWLYKHIFPFSLIRYDVTTGEPIRDPQGHCMAT-SPGEPGLLVAPVSQQSPFLGYAGGPELAQGKLLKDVFRPGDVFFNTGDLLVCDDQGFLRFHDRTGDTFRWKGENVATTEVAEVFEALDFLQEVNVYGVTVPGHEGRAGMAALVL------RPPHALDLMQLYTHVSENLPPYARPRFLRLQESLATTETFKQQKVRMANEGFDPSTLSDPLYVLDQAVGAYLPLTTARYSALLAGNLRI |
| 2WD9 Chain:A ((86-562)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AANVLSGACGLQRGDRVAVVLPRVPEWWLVILGCIRAGL--IFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSCDGW--LNFKKLLNEASTT------HHCVETGSQEASAIY-FTSGTSGLPKMAEHSYSSLGLKAKMDAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDLSSYKFPHLQNCVTVGESLLPETLENWRAQTG-LDIRESYGQTE--------TGLTCMVSKTMKIKPGYMGTAASCYDVQ----IIDDKGNVLPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGD-------FWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPVR-GEVVKAFVVLASQFLSHDPEQL-TKELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRAKLRDKEWK------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290073 for 3903 contacts (-74.3/contact) +
2D Compatibility (PS) -48785 + (NN) -19132 + (LL) 15016
1D Compatibility (HY) -21200 + (ID) 6150
Total energy: -370324.0 ( -94.88 by residue)
QMean score : 0.353
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