Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPAPRAPRALAAAAPASGKAKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQGRLDSTRGLLCGLGAGVAEAVVVVCPMETIKVKFIHDQTSPNPKYRGFFHGVREIVREQGL-KGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNPLITGVFGAIAGAASVFGNTPLDVIKTRMQGLEAHKYRNTWDCGLQILKKEGLKAFYKGTVPRLGRVCLDVAIVFVIYDEVVKLLNKVWKTD |
3I33 Chain:A ((331-402)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------FRGTLEPVEKALRDAKLDKGQIQEI---VLVGGSTRIPK--IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILI--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7769 for 377 contacts (-20.6/contact) +
2D Compatibility (PS) -7589 + (NN) -4462 + (LL) 15384
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -9136.0 ( -24.23 by residue)
QMean score : 0.233
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