Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPVFILGIILLLVGCKQRDERVLMVDEQGSFAVGGTVLV----------DSLGHTFHGDHAYVFYQKPVGARKYPLVFAHGVGQFSKTWETTPDGREGFQNIFLRRRFCVYLVDQPRRGNAGRGT--ESVTISP------------AFDEEVWFNRFRVG-IWPDYFEGVQFKRDKETLDQYFRQMTPTI--GTTDFEVYSDAYAALFDKIGPGVFITHSQGGPVGWNTLLK-TRNIKAIASYEPGGAVPFPEGQLPEEAKFITLSKKMEGIEVPMSVFMEYTKVPIVIYYGDNLPETDERPELYEWTRRLRLMKIWAKMLNDQGGDVTVIHLPEVGLHGNTHFPMSDLNNIEVADLLSEWLHTKALD |
1QLW Chain:A ((7-319)) | -----------------KTPAGPLTLSGQGSFFVGGRDVTSETLSLSPKYDAHG-TVTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEAAW-AIFRFGPRYPDAFKDTQFPVQ--AQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC-PKP------------------------EDVKPLTSIPVLVVFGDHIEEF------PRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QLW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136586 for 2418 contacts (-56.5/contact) +
2D Compatibility (PS) -31512 + (NN) -21068 + (LL) 4764
1D Compatibility (HY) -14400 + (ID) 4950
Total energy: -203752.0 ( -84.26 by residue)
QMean score : 0.431
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