Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRVIFLLTGLFIWTSVLLAQNVPEGVIGAFKEGNSQELNKYLGDKVDLIIQNKST-HADKRTAEGTMAAFFSNHKVGSFNVNHQG-KRDESGFVIGILM----TANGN-----FRVNCFFRKVQNKYVIHQIRIDKTDE
3H51 Chain:A ((25-139))
-----------------------LFDTWNAALATGNPHKVADLYAPDGVLLPTVSNEVRASREQIENYFEMFLTKKPKGVINYRTVRLLDDDSAVDAGVYTFTLTDKNGKKSDVQARYTFVYEKRDGKWLIINHHSSA---
General information:
TITO was launched using:
RESULT:
Template:
3H51.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44549 for 683 contacts (-65.2/contact) +
2D Compatibility (PS) -11438 + (NN) -1453 + (LL) 2696
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -60444.0 ( -88.50 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_3H51.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H51-query.scw
PDB file :
Tito_Scwrl_3H51.pdb
: