Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIMKKKILAYALSALTCGLFTSCSDWLDINHDPNTAEKVDPGYLFNYVAVNWAGTRTG-GDFYIPLSMSSQCQVDGGLDYGG--WD-ESVYTISPYSTGNTWKHYYSVGGNNLMLAIKNAEEADPVNHNAIAQCKILLAEHMYEATMLWGDIPFTESWNGTIKYPKFDSQESVLNGVLSLLDEALQIMDLNDAN----AIDEYDIYYKGDMNKWMTLAKSLKFRTLMVMVDKDPSKATAIGTLLQAGGMVSSASDNLVFPYSAEPGNQNPKYELIELVGGTQILFFASNYMLKPMQERNDPRIPCYFEPG---ADGVYRGLGNREPAV-TDDKDNMLSSVVSSYLFRKDAPELIYSCQEQLLLEAEAYARGLGVAQNLSKANELYKKGIREACAFYGVAEADIDTYVTGLP----------------------------ELTALTQEKALYEIHMQQWIDLMDRPFEEFVQWRRSGTAGNEVPTLQVPEDATSKELIRRWEYSPEEMTANINAPKE--------SPKIWEKLWFDL |
| 3SGH Chain:A ((16-493)) | ---------------------------------------PASNLLSTMFNVYACPQQNACQEINCMWAS-FSGQVTATANWSFGKNIFAYYNASEGHNDSSWGRLYGYIYPSFFLVENSTEK----KGVIYAMAQLTRVYGMQLLASLQGPIPYTQMKAGETEAP-YDNEQTVWHAMFDDLDNAITILKSAATFGVNQDLAVVDQFYKGDCSKWLKFANTLKLRMAIRISGVEPEYAQTKAQEAVLGGVMESVGDSSYDTTNGG-INENGYAIVS-----GWPEVRANACLVSYMNGYNDPRRPAYFTPQTQTAAGGYVGVRSGSAEIPEPTVYA-NYSKLFI-ATDKTLPQPVMYAAEAAFLRAEGALKGWNMG---GDAKTFYEKGVRLSFEEFGVSG--ADDYLADATSIPGNYVDNLIAGHTGNNYTNQSSITIKWEDGADDAKKLERVLTQKWIACYPDPMNGWADFRRTGYPRIFPATESMNADCNTGRGQRRLRFTRSEYNNNKANVEAAVSMLSNGKDSNGTDLWWAM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89440 for 3869 contacts (-23.1/contact) +
2D Compatibility (PS) -45690 + (NN) -19758 + (LL) 3672
1D Compatibility (HY) -8800 + (ID) 4550
Total energy: -164566.0 ( -42.53 by residue)
QMean score : 0.357
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