Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKSLLMVMATLTIAGCSQNEMTEMNPDTNRTIGLDVYTEVQTRGTETTTSTLKANAGFGIFAYQTSSAGWNSEKGNTTPNFMYNEHATWT----SDSWGY--TNLRFWPIDDKKITFFAYAPYESKPEVGTDQKITLSGQNAKGAPTITFEVKTSNNWKDMIDLVTDCHTAIQDQTNESNKGTVQFKFSHVLTQIANIK-VKPDVNL-GTDT--KIFVTGLKLDPGSTTLYNKAVYKFDNDT-WEAISPDASYFSTEQDLSDFLNKTTTDQWGYNKSSINVSDDQNATALFSDTEALYFIPVNNKNGTTNAGDLKLKINYDIVTKVTDTSNLTSTITNKEVSLP----KNTFKKGTKHTYVLTIKMNAIKITVEDNMEGWTDDSDSDINVEK |
| 4K4K Chain:A ((8-270)) | --------------------------PTDGRVALEATSG-----------DKTWEAGDAIGIYMLNGDAT-----------DGNGNRKYTTAQTAENGSFTAAEGQTIYFPVDASQRDFVAYYPYRETLA--------------DG-NVYTVDVS-VQTPQKDIDLMGAAKVEGK----DKTDPKVAFVFTHKLVKLDITIKADGTSLTDADLAGTTVSISN---------QQTAATYNVVTGGDATVTTGT-TKEIV--L-----------------------------HTDGLKAEGIVLPAAST------AGMALTFTVP----GLE-------GQAFHWDVNSAAQSKAFVAGSKYLYTITISKAGVEV--SSKVEDWT----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70674 for 1758 contacts (-40.2/contact) +
2D Compatibility (PS) -26339 + (NN) -6878 + (LL) 6520
1D Compatibility (HY) -4400 + (ID) 1950
Total energy: -103721.0 ( -59.00 by residue)
QMean score : 0.209
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