Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHHHHHHSHMQQAISEKDRGNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQA---VTELSKIKK
4JA7 Chain:A ((14-133))
----------LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPNDKDAKMKYQECSKIVK
General information:
TITO was launched using:
RESULT:
Template:
4JA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16949 for 884 contacts (19.2/contact) +
2D Compatibility (PS) -12960 + (NN) -6755 + (LL) 316
1D Compatibility (HY) -8400 + (ID) 2300
Total energy: -13150.0 ( -14.88 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_4JA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JA7-query.scw
PDB file :
Tito_Scwrl_4JA7.pdb
: