Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------MKKNSLYIISS---LFFACV---LFVYATATNFQNSTSARQVKTETYTNTVTNVPID-----IRYNSDKYFISGFASE----VSVVLTGANRLSLASEMQE-STRKFK-------------------VTADLTDAGVGTIEVPLSIEDLPN-----GLTAVA-TPQKITVKIGKK----AQK----DKVKIVPEIDPSQIDSRVQIENVM-VSDKEVSI---TSDQETLDRIDKIIAVLPTSER----ITGNY----SGSVP-------LQAIDRNGVVLPAVI--TPFDTIMKVT-----TKPVAPSSSTSNSSTSSSSETSSSTKATSSKTN--------------------
3FHC Chain:A ((9-405))IPEREMKDFQFRALKKVRIFDSPEELPKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNAPVLMLLSTDGVLCPFYMIN


General information:
TITO was launched using:
RESULT:

Template: 3FHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67302 for 1621 contacts (-41.5/contact) +
2D Compatibility (PS) -28073 + (NN) -3415 + (LL) 0
1D Compatibility (HY) -12800 + (ID) 2600
Total energy: -114190.0 ( -70.44 by residue)
QMean score : 0.344

(partial model without unconserved sides chains):
PDB file : Tito_3FHC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FHC-query.scw
PDB file : Tito_Scwrl_3FHC.pdb: