Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-GRIPSPPSKTSLDIAEELQ-NDKGVSFAFQAREEELGAFTKRTLFAYSGDGLTGPFKAPASAELSSFLTAHPKGR-WLIAFPLGTGI------VSVDEGILTLEISRSLPEVGSGS-SFYLTEK
2QUO Chain:A ((4-126))
KEILDLAAATERLNLTDALNSNPAGNLYDWRSSNSY--PWTQKLNLHLTITATGQKYRILASKIVDFNIYSNNFNNLVKLEQSLGDGVKDHYVDISLDAGQYVLVMKANSSYSGNYPYSILFQKF
General information:
TITO was launched using:
RESULT:
Template:
2QUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32292 for 738 contacts (-43.8/contact) +
2D Compatibility (PS) -11855 + (NN) -3324 + (LL) 4
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -54267.0 ( -73.53 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_2QUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QUO-query.scw
PDB file :
Tito_Scwrl_2QUO.pdb
: