Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFG-NNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
| 4JZZ Chain:A ((25-376)) | -------------VWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTG-------------------------------------------------------------------------GSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTRPNN----------------------DIRQAHCNLSKTQWENTLEQIAIKLKEQFGNNKT-IIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLF--TWNDT-----------GRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGG---NGTEIFRPGGGDMRDNWRSELYKYKVVKIE--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JZZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147811 for 2681 contacts (-55.1/contact) +
2D Compatibility (PS) -36376 + (NN) -13265 + (LL) 7280
1D Compatibility (HY) -41600 + (ID) 13550
Total energy: -245322.0 ( -91.50 by residue)
QMean score : 0.309
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