Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MDATPNAVELTVDNAWFIAETIGAGTFPWVLAITMPYSDAAQRGAFVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGIVALRTGTGKTSNKTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLAHRPPARFDEFSLPTRVGARADERLRSGVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRVLVSPSRAFDGEWVSTFSPGTPFAIAVAIQTLTACLPDGQWFPGQRVSRDFSTQSS |
| 1YAR Chain:O ((10-237)) | KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNSTYGRAQAEK----SP-----------EQLLGVLQRYQDLCH----NVYCQAETIRTVIAIRIPEHKEEDN------------------------------LGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMY--ALREYLSARSTVEDKLLGG---------------------------GSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGSDHMVS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59242 for 1518 contacts (-39.0/contact) +
2D Compatibility (PS) -22230 + (NN) 3277 + (LL) 4788
1D Compatibility (HY) -2800 + (ID) 2150
Total energy: -78357.0 ( -51.62 by residue)
QMean score : 0.067
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