Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MLILISPA--KTLDYQSPLTTT---RYTLPELLDNSQQLIHEARKLTPPQ----------------ISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGL--------------QAETFSEDDFDFAQQHLRML------------SGLYGVLRPLDLMQPYRLEMGI----------RLENARGKDLYQFWG------DIITNKL-NEALAAQGDNVVINLASDEYFKSVKPKKLNAEIIK----PVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR- |
1NW3 Chain:A ((5-332)) | LELRLKSPVGAEPAVYPWPLPVYDKHHDAAHEIIETIRWVCEEIPDLKLAMENYVLIDYDTKSFESMQRLCDKYNRAIDSIHQLWKGTTQPMKLNTRPSTGLLRHILQQVYNHSVTDPEKLNNYEPFSPEVYGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAPLNFRINSRNLSDIGTIMRVVELSPLKGSVSWTGKPVSYYLHTIDRTILENYFSSLKNP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6612 for 1770 contacts (-3.7/contact) +
2D Compatibility (PS) -27222 + (NN) -8620 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -49104.0 ( -27.74 by residue)
QMean score : 0.219
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