Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLPDIVNMYFDADSCNDTDALSETFAPDAVVEDEG-----ARHQGVVAILRWWVAAKKAAS-YVAEPLESTVDGDKALVRAKVSGRFP--GSPVTLTY--SFTIKDGRIARLEIQ
3FGY Chain:A ((9-119))
----QIVKDFFAAMGRGDKKGLLAVSAEDIEWIIPGEWPLAGTHRGHAALAALLQKASEMVEISYPEPPEFVAQGERVLVVGFATGRVKSTNRTFEDDWVFAITVRKSKVTSIRE-
General information:
TITO was launched using:
RESULT:
Template:
3FGY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41128 for 620 contacts (-66.3/contact) +
2D Compatibility (PS) -10927 + (NN) -1822 + (LL) 288
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -56689.0 ( -91.43 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_3FGY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FGY-query.scw
PDB file :
Tito_Scwrl_3FGY.pdb
: