Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MITYKKLLDELKKEIG-----------PIAKIFLNKAMESLGYDDVDDSNYKEILSVLKMNKELREYVEIVEERLEKEG
1M7K Chain:A ((376-456))
TPPSIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKELLEL--DSVETGGQ---DSVRQARKEAVCKIQAILEKLEKKG
General information:
TITO was launched using:
RESULT:
Template:
1M7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31091 for 388 contacts (-80.1/contact) +
2D Compatibility (PS) -7219 + (NN) -8640 + (LL) 292
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -50308.0 ( -129.66 by residue)
QMean score : 0.789
(partial model without unconserved sides chains):
PDB file :
Tito_1M7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M7K-query.scw
PDB file :
Tito_Scwrl_1M7K.pdb
: