Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSETTIILTDDGVTDIGMARNTIHQMVGLVDDLVASEATASQLREALYAALARGLGFQASVGQSSPLL-LRRSVLLSLRGLARRLARIEADALTDDIQPRDIVLSAKELSEWLQEGDVVTVTIPGGPCTRYRILEGDTSNG
1HX1 Chain:B ((1-112))
G----------N------SPQEEVELKKLKHLEKSVEKIADQLEELNKELTGIQQGFLPKDLQAEALCKLDRRVKATIEQFMKILEEIDTLILPENF--KDSRLKRKGLVKKVQAFLAECDTVEQNICQE-----------
General information:
TITO was launched using:
RESULT:
Template:
1HX1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21430 for 699 contacts (-30.7/contact) +
2D Compatibility (PS) -11843 + (NN) -4636 + (LL) 1252
1D Compatibility (HY) -400 + (ID) 1200
Total energy: -38257.0 ( -54.73 by residue)
QMean score : 0.262
(partial model without unconserved sides chains):
PDB file :
Tito_1HX1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HX1-query.scw
PDB file :
Tito_Scwrl_1HX1.pdb
: