Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYRPFGSTGVAVSALTLRLADNPR-LRANDWRALVFTALENGVNSFQIDGDA---------PELLKGAGEAFAS-VERHLLFLTWRLRGDA----------KQLGPHTLDALKRSAFEGLSLDYLDLLLINDPQS-----------------ASLPMAFESGLQDLQKGRALRGLGVASRGDIDP-GLL------ANDLVTAVSSPYNLSSGWAERHRIRQASQNNFAVIGEDFWPQALREVADKAPPKP--------SFWQRRTD--PLADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVVERDLPTGVCAQIEMARFSAQEREKAARRP |
| 1LQA Chain:A ((1-337)) | MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEIEAV-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111543 for 2395 contacts (-46.6/contact) +
2D Compatibility (PS) -29301 + (NN) -6297 + (LL) 1188
1D Compatibility (HY) -12400 + (ID) 2600
Total energy: -160953.0 ( -67.20 by residue)
QMean score : 0.403
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