Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKPNLRPKLGSSALIAFLSLYSSLVL----NYAFFAKVVELHPFNGTGADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKSMLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAAVSFLCALGIAMLQYQDYASFFRNNKSVTHL--IVPSNFIGAGVSKYKDWKRSNIPYTQLDMAVVQNRPAGSLRRFVVLVVGETTRAANWGLN-----GYSRQTTPLLAARGDEIVNFPQVRSCGTSTAHSLPCMFSTF-----DRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKVPNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYVSDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENEYSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR |
| 2W62 Chain:A ((29-489)) | -----------SFEKTPAIKIVGNKFFDSESGEQFFIKGIAYQLQRSGAFETSYID------ALADPKICLRDIPFLKMLGVNTLRV-----------YAIDPTKSH---------DICMEALSAEGMYVLLDLSEPDI----SINRENPSWDVHIFERYKSVIDAMS--------SFPNLLGYFAGNEVTNDHTNTFASPFVKAAIRDAKEYISHS-NHRKIPVGYSTNDDAMTRDNLARYFVCGDVKADFYGINMYEWCGYSTYGTSGYRERTKEFEGYP------------IPVFFSEFGCNLVRPRPFTEVSALYGNKMSS-VWSGGLAYMYFEEENE-YGVVKINDNDGVDILP--------------DFKNLKKEFAKADPKGI----TEEEYLTESVECPHIAVGVWEANEKLPETPDRSKCACLDEILPCEIVPFGKYEEYFSYLCSKVDCSDI--------LANGKTGEY---GEFSDCS---VEQKLSLQLSKLYCKIGANDRHCP------------------------LNDKNVYFNLESLQPC---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252378 for 3467 contacts (-72.8/contact) +
2D Compatibility (PS) -44019 + (NN) -6303 + (LL) 9320
1D Compatibility (HY) -14800 + (ID) 3300
Total energy: -311480.0 ( -89.84 by residue)
QMean score : 0.169
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