Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MPQPTSQQRASVASSQSTQGAVGWSAATG-WVVLFVAVALVVWFVSLDMRHLVGPDEGRYAEISRE-------MFASGDWVT--IRYNALKYFEKPPFHMWVTVVGYELFGLGEWQARLAVALSGLL-----GIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKGLVGIALPGLVLVVYTLVTRDWGLWRRL-HLALGVVVMLVITVPWFYLVSVRNPEFPNFFFIHEHWQRYTSNIHSRSGSVFYFL----PLVIGGFL-------PWAGIFPKLWTAMRAPVEGTQARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLASPVVATLNANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALL------GHETVGRPASGADIAPQIAQKLTPEMPLYGVQMLDHTLPFYLRHPLMMVG------QADELTFGATVEPQR-VVPDVDSFTKLWKNGQPAMAVMSPD---TYLALAPTLSMYVVARDWR----RVVVANVASLAGPQ---- |
| 2GMH Chain:A ((4-584)) | CKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEA---LGVEVYPGYAAAEILFHEDGSVKGIAT-----NDVGIQKDGA--PKTTFERGLELHAKVTIFAEGCHG--------HLAKQLYKKFDLRANCEPQTYGIGLKELWVID--------EKKWKPGRVDHTV--GWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPG---------GLLIGCSPGFMNVP----KIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHV---TEYEDNLKNSWVWKELYSVRNIRPSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSD---QLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GMH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -498851 for 4604 contacts (-108.4/contact) +
2D Compatibility (PS) -55090 + (NN) -9211 + (LL) 4712
1D Compatibility (HY) -400 + (ID) 4400
Total energy: -563240.0 ( -122.34 by residue)
QMean score : 0.173
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