Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --TMEELLTSLQKKCGTECEEAHRQLVCAL--NGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHA----------THNLMELLIA-RHPGIPPTLRDG---------------RLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHELQRKIHSNSPWWLNVIHRAIEFTIDEE--------LVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLLTTQMEELNKCQKLVREAVKNLEGPP--SRNVIESATVCH-------LRP----ARLPLNCCVFCKAD---ELFTEYESKLFSNTVKGQTAIFEEMIED-----------EEGLVDDRAPTTTRGLWAISET-ERSMKAILSFAKSHRFDVEFVDEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLHIIEPHEVEQNRIKLLNDKA-VATSQLQKKLGQLLYLTNLEK--- |
| 4K70 Chain:A ((2-483)) | PGSMEALVRALEEADHAVATVVQSRILEFFMAAGRETPAGVRGLWARALRLACRAYVETGTCEAAVLAENLAGLALWRLRHDWDEGTAPLLELLGVVNGDDTTAALTEAGLRTSAEFGPDAMFRLVSEWCAAFDEALAGARSADDVLAAPRVVPPEQTARALVQPRFATL-YDMDFVQDGLRYVAQHTNWALPLALAVRQMQNEGLKPLTRALFALTIADEFFHDRQNPTLREQFAEAARAVDEAALVPVGEVNATPRTAVEVRVSAALAHGDAYVRELRPGTVARRLRTDQGVLALLDPGAQAVHVAAAADLDHTQVDATGVWEAVQASASPLQVVEALVTAGFTRRHCDLLERAVLDRAPRLTDAQRAVGCTAVVGGVVHRLLDDYGPGLDYVRAYTDVADTLEPLYGDVTAALG-LPEKGVEHVVRHCMAPR-----PPTEHVGAARAALLREVAAAERRAGLAHSAAREALNTWLAFRAQSRWGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3209 for 3226 contacts (1.0/contact) +
2D Compatibility (PS) -43587 + (NN) -15679 + (LL) -188
1D Compatibility (HY) -7200 + (ID) 3350
Total energy: -66795.0 ( -20.71 by residue)
QMean score : 0.271
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