Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MFFSKDEKNPIKRALQGELLQNEPFIQLCTKIENYLMDTEAVNEQLIELNEQLTMRLKEKG-LKPGEKGATKQLRTLIQEILTEAGFREG----MLQTIGNK-------PLKKE--DFMFLVSSG----FMLKDSSLRASSHGELTHAIQWCLIILKQKKDSSFLENIPTSEICDRIYKKLGHQDSSNPNYPFTCWDVLIDKLGEIDSRSPEWLSDHIQNDEDQIFPVLREVIKNRTEKGKTEENKGKLQKKLENPPEHYEKHEEIENILMPKPK |
| 1CP2 Chain:A ((1-269)) | MRQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKADSTRLLLGG-----LAQKSVLDTLREEG--EDVELDSILKEGYGGIRCVESGGPEPGVGCAGRGIITSINMLEQLGAYTDDLDYVFYDVLGDVVCGGFAMPIREGKAQEIYIVASGEMMALYAANNISKGIQKYAKSGGVRLGGIICNSRKVAN------EYELLDAFAKELGSQ---------LIHFVPRSPMVTKAEINKQTVIEY--DPTCEQAEEYRELARKVDANELFVIPKPMTQERLEEILMQYG-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23569 for 1620 contacts (14.5/contact) +
2D Compatibility (PS) -22907 + (NN) -2934 + (LL) 1824
1D Compatibility (HY) -3600 + (ID) 1950
Total energy: -5998.0 ( -3.70 by residue)
QMean score : 0.122
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