Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATTRSLDHAKAEAELAINIKKATSPEETAPKRKHVRSCIVYTWDHKS-SLSFWAGLKVQPILADEVQTFKALITIHKVLQEGHPVTLREAMANRGWIDSLSRGMMGEG--VRGYGPLIREYVHFLLAKLSFHKQ-HPEFNGTFEYEEYISLKAIHDPNEGYETITDLMTLQDKIDQFQKLIFSHFRHIGNNECRISALVPLVAESYGIYKFITSMLRAMHSSTGD------NEALEPLRQRYDAQHYRLVKFYYECSNLRYLTSLITIPKL-------------- |
| 1HF8 Chain:A ((19-281)) | ------------GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLA-SRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFDFTKVKRGAD--GVMRTMNTEKLLKTVPIIQNQMDALLD-----FNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGL-DIYKKFLTRMTRISEFLKVAEQVGIDRGD--IPDLSQAPSSLLDALEQH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84477 for 1816 contacts (-46.5/contact) +
2D Compatibility (PS) -25161 + (NN) -11089 + (LL) 2520
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -127607.0 ( -70.27 by residue)
QMean score : 0.351
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