Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
FEKCGKRVDRLDQRRSKLRVVGGHPGNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGACEGDYGGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVMRLGHHHHHH
2ASU Chain:B ((1-225))
-------------------VVGGHPGNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGACEGDYGGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVM---------
General information:
TITO was launched using:
RESULT:
Template:
2ASU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -184641 for 1911 contacts (-96.6/contact) +
2D Compatibility (PS) -24392 + (NN) -11266 + (LL) 1664
1D Compatibility (HY) -34800 + (ID) 11200
Total energy: -264635.0 ( -138.48 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_2ASU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ASU-query.scw
PDB file :
Tito_Scwrl_2ASU.pdb
: