Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKLYTTLLIACLAAGFTACNDDDCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSC-IIKNKYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNYDSANIIH--SNGKFYLLVGTSTSNRDHFYIVDAKTLYYENSAVVGA-N-LSGLTILN-EQYGLVTGDGIRRIDLKSLNNVRIKNERLLCFYNSIIYNGKVLSNDTYKDESKVKYYDVNELIAAKEGEAPAVTELDIIQKQKINFV-LAKDG-NVYT---LESADNGCN---IVKIK-NDFTLEKVFANFQPAKGPYHSSPTIGMVASETENIIYLVSTDGAIYK-YILGDSDSLKAPFIAAESGVSITAPLQLNQQSGELYVTYTEERKDESKIVVYSKDGKVLHTVDCGESVPSQILFNN------ |
| 3DSM Chain:A ((1-327)) | -------------ASGLFITNEGNFQ-YSNATLSYYDP----------------ATCEVENEVFYRAN------------------GFKLGD----VAQSMVIRDGIGWIVV--------NNSHVIFAIDINTFK--------------------EVGRITGFTSPRYIHFLSDEKAYVTQIWDY----RIFIINPKTYEITGYIECPDMDMESGSTE-QMVQYGK------------------------YVYVNCWSYQNRILKIDTETDK---------------------VVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF------KLGDWPS-EVQLNGTRDTLYWINND--IWRMPVEADRVPVR-PFLEF-RDTKYYG-LTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVGI-IPGAFCWKLEHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131028 for 2441 contacts (-53.7/contact) +
2D Compatibility (PS) -32954 + (NN) -10522 + (LL) 8176
1D Compatibility (HY) -21200 + (ID) 3550
Total energy: -191078.0 ( -78.28 by residue)
QMean score : 0.205
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