Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQKKTYAV-FLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDSMDFTLYQGDTKMSDTDPEDYSEKLQGSTINADKSVEGNLFFVVDKGKQYELNYTPESYGDKKPKSVTFKIDGKDKKIL---ATADKLQDSAKA--LSAYVDVLLFGKDNADFEKITG-ANKNEIVNDFNESAKDGYLSASG-------LSSTYADSKALDNIV-----NGIKEGLSKNSSIQAKTTSISKD-EAIVEATVKPVDASSLSDRIEDKVKDYYSKNSSASY---------------------EEAVKYALQVYPE----------EFKKLGPASSEKTVEVKMKKNDI---DQWQLDMDDYRAAELVEAFIKE---------------------------------------------------- |
| 4HU8 Chain:A ((3-452)) | --NEITLTIGQQKDLASMVPAKFAGQELSWTSSDPETASVTDKGIVTALKFSSGGANLFLKAPATGEAIITVTA-----GKQSHSVKVITTVKGKEDIEKLPPLKDHFKDYFLIGNIFNNRDVSGSMMDNDWLAHHYAI-LTPENH--MKPSNLTNNRNETTGEITYTFSTADRMVNAAIAEGLKIHGHTLLWHQQIPPWQRSMESAAKDAALSVMKKYITEVMTHYKGKIYSWDVLNEIFPDGRGDNWTTAMRPENPWFKSIGSDFVYEAYLAARQADPNAILYYNDYNMDQAGKAALIAAMVRDVNAKYKQAYPRETRLLIEGIGMQSHHNMDVPASNIRNTINRYRELGVKISVSELDILCMGWSAFRGSTGQGADKDDMTIATNRNILDQAYKFNEYMKLYLENSDIIERVSMWGVSDRYSWRSGGLPLLFDADNKAKPAYYSFVRAREDYEAAKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 88637 for 2413 contacts (36.7/contact) +
2D Compatibility (PS) -35960 + (NN) -1696 + (LL) 384
1D Compatibility (HY) -4800 + (ID) 2950
Total energy: 43615.0 ( 18.08 by residue)
QMean score : 0.178
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