Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------ATMAFHPMLCRLELSVSAAPPASPIDATLLRSLITSVLNSSWVDLGGNTANEKVLCAIGLIEAFCRERVIPPTSNSFNTSVTYHIMVEDLDPDDLGNIQLINKPLLSLEGDLKVLGSYQLTFQTIPGHSEPRSMTDNGIYHSDSPFFQIALGHALLGTGKIYDHITRAL----RVAPITIAPEKRKEPLSSYMV- |
4FQG Chain:A ((1-186)) | SHMKREEAIQNFKALLSDM--VRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLD--ETSAITLTSTWKEVKKIIKED------------PRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67333 for 1129 contacts (-59.6/contact) +
2D Compatibility (PS) -17643 + (NN) 1757 + (LL) 572
1D Compatibility (HY) 2000 + (ID) 1100
Total energy: -81747.0 ( -72.41 by residue)
QMean score : 0.173
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