Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSSHHHHHHSSGPQQGLRSNSDDAEKPVVPVPTGDVAIYTTTSSLTRDLTRDAVNFSPKDNLAPTTITLNPAEQYQTMDGFGAAITGSTCYNLLLMKPADRHAFLTETFSDKDGFGFSYIRISIGCSDFSLSEYTCCD---TKGIENFALQSEEKDYILPILKEILAINPS-IKVIAAPWTCPKWMKVKSLTDRTPLDSWTNGQLNPD----YYQDYATYFVKWIQAFKAEGIDIYAVTPQNEPLNR----GNSASLYMEWEEQRDFVKTALGPQMKAAGL-STKIYAFDHNYNYDNIESQKNYPGKIYEDAAASQYLAGAAYHNYGGNR----EELLNIHQAYPEKELLFTETSIGT--WNSG-RDLSKRLMEDMEEVALGTINNWCKGVIVWNLMLDNDRGPNREGGCQTCYGAVDINNSDYKTIIRNSHYYIIAHLSSVVKPGAVRIATTGYTDNGITCSAFENTDGTYAFVLINNNEKSKKITVSDGQR-HFAYDVPGKSVTSYRWAKSK |
| 2NT0 Chain:A ((14-496)) | ------------VVCVCNATYCDSFDP-PTFPALGTFSRYESTRSGR-RMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSE-EGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNG-------KGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLL-----LPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNF--VDSPIIVDI-TKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NT0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221413 for 4204 contacts (-52.7/contact) +
2D Compatibility (PS) -50216 + (NN) -24470 + (LL) 708
1D Compatibility (HY) -27200 + (ID) 5650
Total energy: -328241.0 ( -78.08 by residue)
QMean score : 0.432
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