Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDERPHYYGKHGTPQKYDPTFKGPIYNRGCTDIICCVFLLLAIVGYVAVGIIAWTHGDPRKVIYPTDSRGEFCGQKGTKNENKPYLFYFNIVKCASPLVLLEFQCPTPQICVEKCPDRYLTYLNARSSRDFEYYKQFCVPGFKNNKGVAEVLQDGDCPAVLIPSKPLARRCFPAIHAYKGVLMVGNETTYEDGHGSRKNITDLVEGAKKANGVLEARQLAMRIFEDYTVSWYWIIIGLVIAMAMSLLFIILLRFLAGIMVWVMIIMVILVLGYGIFHCYMEYSRLRGEAGSDVSLVDLGFQTDFRVYLHLRQTWLAFMIILSILEVIIILLLIFLRKRILIAIALIKEASRAVGYVMCSLLYPLVTFFLLCLCIAYWASTAVFLSTSNEAVYKIFDDSPCPFTAKTCNPETFPSSNESRQCPNARCQFAFYGGESGYHRALLGLQIF------NAFMFFWLANFVLALGQVTLAGAF--ASYYWALRKPDDLPAFPLFSAFGRALRYHTGSLAFGALILAIVQIIRVI-LEYLDQRLKAAENKFAKCLMTCLKCCFWCLEKFIKFLNRNAYIMIAIYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFLLGKLLIVGSVGILAFFFFTHRIRIVQDTAPPLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFLEDLERNDGSAERPYFMSSTLKKLLNKTNKKAAES |
| 3N9N Chain:A ((9-521)) | ----------------------------------------------------------------PKESDRCGGCGKFTHEDKKND----------------------FQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPHTG----------HSIRYKVVAPHRYRWYSPNEKHLGIEVGSKTWIEDFITRENTVPS--PTDDEVCIVEDGYEFRREFEKLGG--------------ADNWGKVFMVKDMDG-------------LNMTMPKPGFDLEDVVKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTKNRPLLYNFLSLEFSDNNEMKEIAKPPRFVQEIS--MVNRLWP---------------------DVSGAEYIKLLQREEYLPEDQRPKVEQFCLAGMAGSYTDFHVDF---GGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQ---TLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRSEEKFYFP---------------------------------NFELLHWMYMRNVLLEKITEANQEGSDMREQ----EKNIWTASQIMKAEMERWMDRELRLG-------------------------------------PEKNAILPTDDKNKIMISVRKQIEIQTKIQNAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230358 for 3707 contacts (-62.1/contact) +
2D Compatibility (PS) -50344 + (NN) -8454 + (LL) 21392
1D Compatibility (HY) -10400 + (ID) 3200
Total energy: -281364.0 ( -75.90 by residue)
QMean score : 0.145
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