Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAATAAAALAAADPPPAMPQAAGAGGPTTRRDFYWLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNH-------HYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGH----VHRLMAGSMAGMTAVICTYPLDMVRVRLAFQVK-GEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHVNLLCGGVAGAIAQTISYPFDVTRRRMQLGTVLPEFEKCLTMRDTMKYVYGHHGIRKGLYRGLSLNYIRCIPSQAVAFTTYELMKQFFHLN
4C9Q Chain:A ((30-305))--------------------------------------NFLMGGVSAAIAKTAASPIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNF-AFKDKIKLMFGFKKE-GYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKS-ARQFNGLTDVYKKTL-KSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLK-------PL-----------FL-----ASFLLGWVVTTGASTCSYPLDTVRRRMMMTS--GQAVKYNGAIDCLKKIVASEGV-GSLFKGCGANILRSVAGAGVISMYDQLQMILFGK-


General information:
TITO was launched using:
RESULT:

Template: 4C9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108587 for 1865 contacts (-58.2/contact) +
2D Compatibility (PS) -25444 + (NN) 4979 + (LL) 3700
1D Compatibility (HY) -16800 + (ID) 4150
Total energy: -146302.0 ( -78.45 by residue)
QMean score : 0.134

(partial model without unconserved sides chains):
PDB file : Tito_4C9Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C9Q-query.scw
PDB file : Tito_Scwrl_4C9Q.pdb: