Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRV-----YTSMSDCLIKTVRSEGYFGMYRGAAVNLTLVTPEKAIKLAANDFFRH----QLSKDGQKLTLLKEMLA-GCGAGTCQVIVTTPMEMLKIQLQ-DAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRSRGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAAVAVNPCDVVKTRL--QSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFGIAQVVYFLGIAESLLGLLQDPQA |
| 2C3E Chain:A ((1-278)) | -SDQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCIT------------------------KIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAK--GMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGA-DIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56278 for 1883 contacts (-29.9/contact) +
2D Compatibility (PS) -27127 + (NN) -2773 + (LL) 3332
1D Compatibility (HY) -15200 + (ID) 3700
Total energy: -101746.0 ( -54.03 by residue)
QMean score : 0.192
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