Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQEPLLGAEGPDYDTFPEKPPPSPGDRARVGTLQNKRVFLATFAAVLGNFSFGYALVYTSPVIPALERSLDPDLHLTKSQASWFG----------------SVFTLGAAAGGLSAMILNDLLGRKLSIMFSAVPSAAGYALMAGAH---GLWMLLLGRTLTGFAGGLTAACIPVYVSEIAPPGVRGALGATPQLMAVFGSLSLYALGL------LLPWRWLAVAGEAPVLIMILLLSFMPNSPRFLL-SRGRDEEALRALAWLRGTDVDVHWEFEQIQDNVRR--QSSRVSWAEA-RAPHVCRPITVALLMRLLQQLTGITPILVYLQSIFDSTAVLLPPKDDAAIVGAVRLLSVLIAALTMDLAGRKVLLFVSAAIMFAANLTLGLYIHFGPRPLSPNSTAGLESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGYAVGWGPITWLLMSEVLPLRARGVASGLCVLASWLTAFVLTKSFLPVVSTFGLQVPFFFFAAICLVSLVFTGCCVPETKGRSLEQIESFFRTGRRSFLR
4PYP Chain:A ((11-455))------------------------------------RLMLAVGGAVLGSLQFGY----NTGVINAPQKVIEE--FYTQTWVHRYGESILPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVLKKLRGT-ADVTHDLQEMKEESRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIG-SGIVNTAFTVVSLFVVQRAGRRTLHLIGLAGMAGCAILMTI------------ALALLEQLPW----------MSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYV-FIIFTVLLVLFFIFTYFKVPET---------------------


General information:
TITO was launched using:
RESULT:

Template: 4PYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -370819 for 3622 contacts (-102.4/contact) +
2D Compatibility (PS) -43753 + (NN) -21013 + (LL) 3440
1D Compatibility (HY) -37200 + (ID) 6550
Total energy: -475895.0 ( -131.39 by residue)
QMean score : 0.390

(partial model without unconserved sides chains):
PDB file : Tito_4PYP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PYP-query.scw
PDB file : Tito_Scwrl_4PYP.pdb: