Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGAGPKRRALAAPAAEEKEEAREKMLAAKSADGSAPAGEGEGVTLQRNITLLNGVAIIVGTIIGSGIFVTPTGVLKEAGSPGLALVVWAACG--VFSIVGALCYAELGTTIS-KSGGDYAYMLEVYGSLPAFLKLWIELLIIRPSSQYIVALVFA----TYLLK-PLFPTCPVPEEAAKLVACLCVLLLTAVNCYS-VKAATRVQD-AFAAAKLLALALIILLGFVQIGKGDVSNLDPNFSFEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMINPYRNLPLAIIISLPIVTLVYVLTNLAYFTTLSTEQMLSSEAVAVDFGNYHLGV---MSWIIPVFVGLSCFG---SVNGSLFTSSRLFFVGSREGHLPSILSMIHPQLLTPVPSLVFTCVMTLLYAFSKDIFSVINFFSFFNWLCVALAI---------IGMIWLRHRKPELERPIK------VNLALPVFFILACLFLIAVSFWKTPVECGIGFTIILSGLPVYFFGVWWKNKPKWLLQGIFSTTVLCQKLMQVVPQET |
| 4DJK Chain:A ((12-431)) | ------------------------------------------------QLTLLGFFAITASMVMA--VYEYPT-----FATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGW---GVFAWVSNTLGPRWGFAAISFGYLQI--AIGFIPMLYFVLGALSYILKWPALNEDPI----TKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLH-----TFFPDFSKVGT-------LVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGV-PVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHFFLHPRARSP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -384857 for 3048 contacts (-126.3/contact) +
2D Compatibility (PS) -37973 + (NN) -13234 + (LL) 3864
1D Compatibility (HY) -32800 + (ID) 4750
Total energy: -469750.0 ( -154.12 by residue)
QMean score : 0.304
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