Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MLVTAY-----------LAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYY--FLEGQIA---ILYVCGLASTVLFGLVASSLVD--WLGRKNSCV------LFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAFWNHVLAVVAGVAAEAVASWIGLGPVAPFVAAIPLLALAGALALRNWGENYDRQRAFSRTCAGGLRCLL---SDRRVLLLGTIQAL------------------FESVIFIFVFLWTPVLD-------PHGAPLGIIFSSFMAASLLGSSLYRIATSKRYHL-----QPMHLLSLAVLIVVFSLFMLTFSTSPGQESPVESFIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVPLHSLACLGLLVLHDSDRKTGTRNMFSICSAVMVMALLAVVGLFTVVRHDAELRVPSPTEEPYAPEL |
| 2HCN Chain:A ((12-582)) | LVNGVVRLLSKPWDTITTKAPEPPEGVKYVLNETTNWLWAFLAREKRPRMCSREEFIRKVNSNAAQW--RSAREAVEDPKFWEMVDEEREAHLRGECHTCRAIWFMWLGARFLEFEALGFLNEDHWLGRKNSGGGVEGLGLQKLGYILREVGTRPGGRIYADDTAGWDTRITRADLENEAKVLELLDGEHRRLARAIIELTYRSGQVVTYALNTFTNLAVQLVRMMEGEGVIGP--DDVEKLTKGKGPKVRTWLSENGEERL-SRMAVSGDDCVVKPLDDRFATSLHFLNAMSKVRKDIQEWKPSTGWYDWQQVPFCSNHFTELIMKDGRTLVTPCRGQDELVGRARISPNVRDTACLAKSYAQMWLLLYFHRRDLRLMANAICSAVPVNWVPTGRTTWSIHAGGEWMTTEDMLEVWNRVWIEENEWMEDK-------TPVEKWSDVPYSG---KREDIWCGSLIGTRARATWAENIQVAINQVRSIIGDEKYVDYMSSLK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -362188 for 3214 contacts (-112.7/contact) +
2D Compatibility (PS) -43094 + (NN) -5342 + (LL) 2156
1D Compatibility (HY) -9600 + (ID) 3500
Total energy: -421568.0 ( -131.17 by residue)
QMean score : 0.273
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